PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_170040_shyp.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 233aa    MW: 26333.5 Da    PI: 5.2308
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_170040_shyp.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.72.7e-054185452
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHH CS
                 HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIk 52
                         + erEr  R+++N+ f++L ++l  +    ++ + Ka++L ++++ +k
  Bv7_170040_shyp.t1 41 VKAERERLKREQLNELFNKLASVLELN----QENNGKASVLNETIRLLK 85
                        5789********************997....344555555555555444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.45E-53599No hitNo description
SuperFamilySSF474591.16E-937103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.0583787IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.4E-641125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.003843100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MGSDIGDDPV LNEESDAPED AVDDGSQSRK RKRGKVPKKI VKAERERLKR EQLNELFNKL  60
ASVLELNQEN NGKASVLNET IRLLKDTVSH IQNLRKENET LLSESHYMAA EKNELKEENT  120
ALEVQIKKLQ NELEERLGQS KPDLNVSPPE SWQREMLTHF AEGHYSQTPT TDLSSQQQPI  180
LGPLYVIPMN PDLQAFQKVD ATPNNQPIAV SKPHARYPTP ADAWPLQLLS KQA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010685315.11e-171PREDICTED: transcription factor bHLH47
RefseqXP_010685316.11e-171PREDICTED: transcription factor bHLH47
TrEMBLA0A0J8BXV31e-171A0A0J8BXV3_BETVU; Uncharacterized protein
STRINGGLYMA05G01150.12e-63(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.34e-54bHLH family protein